Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Gm6139-201ENSMUST00000079261 882 ntBASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Rita1Q9D1H0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rita1Q9D1H0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Rita1Q9D1H0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rita1Q9D1H0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rita1Q9D1H0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Rita1Q9D1H0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rita1Q9D1H0 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rita1Q9D1H0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rita1Q9D1H0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Serp2-204ENSMUST00000228055 705 ntBASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rita1Q9D1H0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rita1Q9D1H0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Mir6236-201ENSMUST00000184437 123 ntBASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Gm8493-201ENSMUST00000196881 489 ntBASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rita1Q9D1H0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Gm43017-201ENSMUST00000198296 752 ntBASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Gm43173-201ENSMUST00000202246 593 ntBASIC18.52■□□□□ 0.56
Rita1Q9D1H0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms