Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Chaf1bQ9D0N7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Chaf1bQ9D0N7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Chaf1bQ9D0N7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Chaf1bQ9D0N7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Chaf1bQ9D0N7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.83■□□□□ 0.61
Chaf1bQ9D0N7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Chaf1bQ9D0N7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chaf1bQ9D0N7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chaf1bQ9D0N7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chaf1bQ9D0N7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chaf1bQ9D0N7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Gm11175-201ENSMUST00000116172 543 ntBASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chaf1bQ9D0N7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chaf1bQ9D0N7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chaf1bQ9D0N7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chaf1bQ9D0N7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Chaf1bQ9D0N7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chaf1bQ9D0N7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Chaf1bQ9D0N7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms