Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Mrps28Q9CY16 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Gm12922-201ENSMUST00000120626 809 ntBASIC18.1■□□□□ 0.49
Mrps28Q9CY16 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Mrps28Q9CY16 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Mrps28Q9CY16 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Mrps28Q9CY16 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Mrps28Q9CY16 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Mrps28Q9CY16 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Mrps28Q9CY16 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Golgb1-201ENSMUST00000023534 498 ntBASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Mrps28Q9CY16 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Mir6236-201ENSMUST00000184437 123 ntBASIC18.04■□□□□ 0.48
Mrps28Q9CY16 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Mrps28Q9CY16 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms