Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.28■□□□□ 0.84
Fcf1Q9CTH6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Fcf1Q9CTH6 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.28■□□□□ 0.84
Fcf1Q9CTH6 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fcf1Q9CTH6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Fcf1Q9CTH6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Fcf1Q9CTH6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Fcf1Q9CTH6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Fcf1Q9CTH6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fcf1Q9CTH6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fcf1Q9CTH6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Fcf1Q9CTH6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Mir7075-201ENSMUST00000184187 82 ntBASIC20.26■□□□□ 0.83
Fcf1Q9CTH6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Fcf1Q9CTH6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.25■□□□□ 0.83
Fcf1Q9CTH6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
Fcf1Q9CTH6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Fcf1Q9CTH6 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Fcf1Q9CTH6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.24■□□□□ 0.83
Fcf1Q9CTH6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fcf1Q9CTH6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Fcf1Q9CTH6 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Gm12251-201ENSMUST00000117893 792 ntBASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fcf1Q9CTH6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Mir6236-201ENSMUST00000184437 123 ntBASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Gm6139-201ENSMUST00000079261 882 ntBASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fcf1Q9CTH6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.19■□□□□ 0.82
Fcf1Q9CTH6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fcf1Q9CTH6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fcf1Q9CTH6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms