Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col25a1Q99MQ5 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col25a1Q99MQ5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.96■□□□□ 0.95
Col25a1Q99MQ5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.96■□□□□ 0.95
Col25a1Q99MQ5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col25a1Q99MQ5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col25a1Q99MQ5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col25a1Q99MQ5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col25a1Q99MQ5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col25a1Q99MQ5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Col25a1Q99MQ5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.91■□□□□ 0.94
Col25a1Q99MQ5 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Gm9988-201ENSMUST00000069786 435 ntBASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col25a1Q99MQ5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col25a1Q99MQ5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col25a1Q99MQ5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col25a1Q99MQ5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col25a1Q99MQ5 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col25a1Q99MQ5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.87■□□□□ 0.93
Col25a1Q99MQ5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms