Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdhb18Q91Y02 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhb18Q91Y02 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhb18Q91Y02 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Pcdhb18Q91Y02 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhb18Q91Y02 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Gm37415-201ENSMUST00000192265 2054 ntBASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhb18Q91Y02 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Gm10493-201ENSMUST00000097270 612 ntBASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhb18Q91Y02 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhb18Q91Y02 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Gm40848-201ENSMUST00000221998 324 ntBASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.97■□□□□ 0.95
Pcdhb18Q91Y02 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb18Q91Y02 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Gm29257-201ENSMUST00000186115 639 ntBASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb18Q91Y02 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb18Q91Y02 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb18Q91Y02 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms