Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
Pcdhga6Q91XY2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhga6Q91XY2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga6Q91XY2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga6Q91XY2 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhga6Q91XY2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhga6Q91XY2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhga6Q91XY2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Pcdhga6Q91XY2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga6Q91XY2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 AV356131-201ENSMUST00000206201 750 ntBASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Gm40848-201ENSMUST00000221998 324 ntBASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Pcdhga6Q91XY2 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga6Q91XY2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Gm10602-201ENSMUST00000098239 609 ntBASIC19.86■□□□□ 0.77
Pcdhga6Q91XY2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhga6Q91XY2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Pcdhga6Q91XY2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.83■□□□□ 0.77
Pcdhga6Q91XY2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga6Q91XY2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga6Q91XY2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga6Q91XY2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga6Q91XY2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga6Q91XY2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga6Q91XY2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga6Q91XY2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms