Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Pcdhga9Q91XX9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Pcdhga9Q91XX9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga9Q91XX9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.89■□□□□ 0.77
Pcdhga9Q91XX9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga9Q91XX9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga9Q91XX9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Pcdhga9Q91XX9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pcdhga9Q91XX9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Pcdhga9Q91XX9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Pcdhga9Q91XX9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Pcdhga9Q91XX9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Pcdhga9Q91XX9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga9Q91XX9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Pcdhga9Q91XX9 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga9Q91XX9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pcdhga9Q91XX9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga9Q91XX9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga9Q91XX9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Pcdhga9Q91XX9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.83■□□□□ 0.76
Pcdhga9Q91XX9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Pcdhga9Q91XX9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Pcdhga9Q91XX9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pcdhga9Q91XX9 Serp2-204ENSMUST00000228055 705 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms