Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb2Q91XX7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Pcdhgb2Q91XX7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Pcdhgb2Q91XX7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgb2Q91XX7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb2Q91XX7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Pcdhgb2Q91XX7 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.87■□□□□ 0.61
Pcdhgb2Q91XX7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Pcdhgb2Q91XX7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhgb2Q91XX7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.84■□□□□ 0.61
Pcdhgb2Q91XX7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.83■□□□□ 0.61
Pcdhgb2Q91XX7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb2Q91XX7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.83■□□□□ 0.61
Pcdhgb2Q91XX7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhgb2Q91XX7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Pcdhgb2Q91XX7 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhgb2Q91XX7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Mir6538-201ENSMUST00000183713 110 ntBASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhgb2Q91XX7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhgb2Q91XX7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhgb2Q91XX7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Pcdhgb2Q91XX7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms