Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rab40cQ8VHQ4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rab40cQ8VHQ4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 Mir6538-201ENSMUST00000183713 110 ntBASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.37■□□□□ 0.21
Rab40cQ8VHQ4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rab40cQ8VHQ4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rab40cQ8VHQ4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rab40cQ8VHQ4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab40cQ8VHQ4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rab40cQ8VHQ4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rab40cQ8VHQ4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rab40cQ8VHQ4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rab40cQ8VHQ4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rab40cQ8VHQ4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rab40cQ8VHQ4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.31■□□□□ 0.2
Rab40cQ8VHQ4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rab40cQ8VHQ4 Gm27502-201ENSMUST00000183495 199 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms