Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf8Q8VC56 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rnf8Q8VC56 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf8Q8VC56 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf8Q8VC56 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf8Q8VC56 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf8Q8VC56 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Gm14117-201ENSMUST00000122417 843 ntBASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rnf8Q8VC56 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rnf8Q8VC56 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rnf8Q8VC56 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.2■□□□□ 0.66
Rnf8Q8VC56 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rnf8Q8VC56 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rnf8Q8VC56 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms