Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ptcd2Q8R3K3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ptcd2Q8R3K3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ptcd2Q8R3K3 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Ptcd2Q8R3K3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Ptcd2Q8R3K3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Trmt13-210ENSMUST00000198454 880 ntBASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ptcd2Q8R3K3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ptcd2Q8R3K3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ptcd2Q8R3K3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ptcd2Q8R3K3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd2Q8R3K3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.4■■□□□ 1.02
Ptcd2Q8R3K3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC21.4■■□□□ 1.02
Ptcd2Q8R3K3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd2Q8R3K3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ptcd2Q8R3K3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ptcd2Q8R3K3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Gm6576-201ENSMUST00000169678 883 ntBASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptcd2Q8R3K3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptcd2Q8R3K3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms