Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Nudcd3Q8R1N4 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nudcd3Q8R1N4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nudcd3Q8R1N4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Gm10420-201ENSMUST00000121713 882 ntBASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Nudcd3Q8R1N4 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nudcd3Q8R1N4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nudcd3Q8R1N4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nudcd3Q8R1N4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nudcd3Q8R1N4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
Nudcd3Q8R1N4 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Nudcd3Q8R1N4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nudcd3Q8R1N4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Gm12366-201ENSMUST00000121722 873 ntBASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Gm5786-201ENSMUST00000085368 882 ntBASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Nudcd3Q8R1N4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nudcd3Q8R1N4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nudcd3Q8R1N4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms