Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atf7Q8R0S1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atf7Q8R0S1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Atf7Q8R0S1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Atf7Q8R0S1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atf7Q8R0S1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atf7Q8R0S1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Atf7Q8R0S1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.83■■□□□ 1.41
Atf7Q8R0S1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Atf7Q8R0S1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atf7Q8R0S1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atf7Q8R0S1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Atf7Q8R0S1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Atf7Q8R0S1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Atf7Q8R0S1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Atf7Q8R0S1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.81■■□□□ 1.4
Atf7Q8R0S1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Atf7Q8R0S1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.8■■□□□ 1.4
Atf7Q8R0S1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.8■■□□□ 1.4
Atf7Q8R0S1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atf7Q8R0S1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atf7Q8R0S1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Atf7Q8R0S1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Atf7Q8R0S1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.78■■□□□ 1.4
Atf7Q8R0S1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Atf7Q8R0S1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
Atf7Q8R0S1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Atf7Q8R0S1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Atf7Q8R0S1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Atf7Q8R0S1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Atf7Q8R0S1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Atf7Q8R0S1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Atf7Q8R0S1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Mir6236-201ENSMUST00000184437 123 ntBASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Atf7Q8R0S1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Atf7Q8R0S1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Atf7Q8R0S1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Atf7Q8R0S1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Atf7Q8R0S1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Atf7Q8R0S1 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.71■■□□□ 1.39
Atf7Q8R0S1 Gm34220-201ENSMUST00000223001 2709 ntBASIC23.71■■□□□ 1.39
Atf7Q8R0S1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atf7Q8R0S1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Atf7Q8R0S1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms