Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4rl1Q8K0S5 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4rl1Q8K0S5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4rl1Q8K0S5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4rl1Q8K0S5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4rl1Q8K0S5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.58■□□□□ 0.89
Rtn4rl1Q8K0S5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4rl1Q8K0S5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4rl1Q8K0S5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn4rl1Q8K0S5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.57■□□□□ 0.88
Rtn4rl1Q8K0S5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Mir6236-201ENSMUST00000184437 123 ntBASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm9988-201ENSMUST00000069786 435 ntBASIC20.55■□□□□ 0.88
Rtn4rl1Q8K0S5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rtn4rl1Q8K0S5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rtn4rl1Q8K0S5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rtn4rl1Q8K0S5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rtn4rl1Q8K0S5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rtn4rl1Q8K0S5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rtn4rl1Q8K0S5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms