Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Gm9949Q8C9F4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Gm9949Q8C9F4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Gm9949Q8C9F4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm9949Q8C9F4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm9949Q8C9F4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm9949Q8C9F4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.85■□□□□ 0.13
Gm9949Q8C9F4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm9949Q8C9F4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm9949Q8C9F4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm9949Q8C9F4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm9949Q8C9F4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm9949Q8C9F4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm9949Q8C9F4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm9949Q8C9F4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Gm9949Q8C9F4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm9949Q8C9F4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.82■□□□□ 0.12
Gm9949Q8C9F4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm9949Q8C9F4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm9949Q8C9F4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms