Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.26■□□□□ 0.51
Col6a6Q8C6K9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
Col6a6Q8C6K9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Reep4-203ENSMUST00000226563 1444 ntBASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col6a6Q8C6K9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col6a6Q8C6K9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col6a6Q8C6K9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col6a6Q8C6K9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col6a6Q8C6K9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Col6a6Q8C6K9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a6Q8C6K9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Col6a6Q8C6K9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms