Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brat1Q8C3R1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brat1Q8C3R1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Brat1Q8C3R1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brat1Q8C3R1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.21■□□□□ 0.99
Brat1Q8C3R1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brat1Q8C3R1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brat1Q8C3R1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Brat1Q8C3R1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.2■□□□□ 0.98
Brat1Q8C3R1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Brat1Q8C3R1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.2■□□□□ 0.98
Brat1Q8C3R1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.19■□□□□ 0.98
Brat1Q8C3R1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Brat1Q8C3R1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brat1Q8C3R1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brat1Q8C3R1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Mir7075-201ENSMUST00000184187 82 ntBASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Brat1Q8C3R1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Brat1Q8C3R1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Brat1Q8C3R1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Brat1Q8C3R1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Brat1Q8C3R1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Brat1Q8C3R1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms