Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ppp4r4Q8C0Y0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ppp4r4Q8C0Y0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ppp4r4Q8C0Y0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ppp4r4Q8C0Y0 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ppp4r4Q8C0Y0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ppp4r4Q8C0Y0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ppp4r4Q8C0Y0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ppp4r4Q8C0Y0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.13■□□□□ 0.81
Ppp4r4Q8C0Y0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ppp4r4Q8C0Y0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ppp4r4Q8C0Y0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ppp4r4Q8C0Y0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ppp4r4Q8C0Y0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ppp4r4Q8C0Y0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.11■□□□□ 0.81
Ppp4r4Q8C0Y0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms