Protein–RNA interactions for Protein: Q8C0C4

Ccser1, Serine-rich coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccser1Q8C0C4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccser1Q8C0C4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccser1Q8C0C4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccser1Q8C0C4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccser1Q8C0C4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Ccser1Q8C0C4 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Gm12251-201ENSMUST00000117893 792 ntBASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccser1Q8C0C4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccser1Q8C0C4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccser1Q8C0C4 Mir6236-201ENSMUST00000184437 123 ntBASIC21.7■■□□□ 1.06
Ccser1Q8C0C4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
Ccser1Q8C0C4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.69■■□□□ 1.06
Ccser1Q8C0C4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Ccser1Q8C0C4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccser1Q8C0C4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccser1Q8C0C4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccser1Q8C0C4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Ccser1Q8C0C4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccser1Q8C0C4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccser1Q8C0C4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Gm8493-201ENSMUST00000196881 489 ntBASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Spcs1-204ENSMUST00000226782 949 ntBASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Serp2-204ENSMUST00000228055 705 ntBASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ccser1Q8C0C4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccser1Q8C0C4 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccser1Q8C0C4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccser1Q8C0C4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Gm10209-201ENSMUST00000203397 1607 ntBASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccser1Q8C0C4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccser1Q8C0C4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms