Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chd9Q8BYH8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Smad6-203ENSMUST00000179458 273 ntBASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Gm15565-201ENSMUST00000118890 427 ntBASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.12■□□□□ 0.17
Chd9Q8BYH8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chd9Q8BYH8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chd9Q8BYH8 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Gm715-201ENSMUST00000117865 831 ntBASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chd9Q8BYH8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chd9Q8BYH8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chd9Q8BYH8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chd9Q8BYH8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.06■□□□□ 0.16
Chd9Q8BYH8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Chd9Q8BYH8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms