Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Prpf18Q8BM39 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.02■□□□□ 0.64
Prpf18Q8BM39 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf18Q8BM39 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf18Q8BM39 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Prpf18Q8BM39 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
Prpf18Q8BM39 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Prpf18Q8BM39 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19■□□□□ 0.63
Prpf18Q8BM39 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Prpf18Q8BM39 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19■□□□□ 0.63
Prpf18Q8BM39 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Prpf18Q8BM39 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Prpf18Q8BM39 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Prpf18Q8BM39 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Prpf18Q8BM39 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Prpf18Q8BM39 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Prpf18Q8BM39 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms