Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC27■■□□□ 1.91
Col16a1Q8BLX7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Col16a1Q8BLX7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.98■■□□□ 1.91
Col16a1Q8BLX7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC26.97■■□□□ 1.91
Col16a1Q8BLX7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Col16a1Q8BLX7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Col16a1Q8BLX7 Gm42778-201ENSMUST00000199644 553 ntBASIC26.97■■□□□ 1.91
Col16a1Q8BLX7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col16a1Q8BLX7 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Col16a1Q8BLX7 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Gm10602-201ENSMUST00000098239 609 ntBASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col16a1Q8BLX7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col16a1Q8BLX7 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Col16a1Q8BLX7 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Col16a1Q8BLX7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Col16a1Q8BLX7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Col16a1Q8BLX7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
Col16a1Q8BLX7 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC26.89■■□□□ 1.9
Col16a1Q8BLX7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Col16a1Q8BLX7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC26.89■■□□□ 1.9
Col16a1Q8BLX7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC26.88■■□□□ 1.89
Col16a1Q8BLX7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Col16a1Q8BLX7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Col16a1Q8BLX7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC26.87■■□□□ 1.89
Col16a1Q8BLX7 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Col16a1Q8BLX7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Col16a1Q8BLX7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Col16a1Q8BLX7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Col16a1Q8BLX7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms