Protein–RNA interactions for Protein: Q8BGR1

Pdzph1, MCG20355, mousemouse

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzph1Q8BGR1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Pdzph1Q8BGR1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Pdzph1Q8BGR1 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Pdzph1Q8BGR1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Pdzph1Q8BGR1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Gm7514-201ENSMUST00000209475 934 ntBASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Ap3s1-204ENSMUST00000225520 957 ntBASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC24.43■■□□□ 1.5
Pdzph1Q8BGR1 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Pdzph1Q8BGR1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Pdzph1Q8BGR1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pdzph1Q8BGR1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pdzph1Q8BGR1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdzph1Q8BGR1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdzph1Q8BGR1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdzph1Q8BGR1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pdzph1Q8BGR1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pdzph1Q8BGR1 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC24.38■■□□□ 1.49
Pdzph1Q8BGR1 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.38■■□□□ 1.49
Pdzph1Q8BGR1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 Mir5133-201ENSMUST00000174955 77 ntBASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.37■■□□□ 1.49
Pdzph1Q8BGR1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Gm27801-201ENSMUST00000184174 223 ntBASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pdzph1Q8BGR1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Pdzph1Q8BGR1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Gm4968-201ENSMUST00000071458 858 ntBASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pdzph1Q8BGR1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pdzph1Q8BGR1 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.33■■□□□ 1.49
Pdzph1Q8BGR1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Pdzph1Q8BGR1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.33■■□□□ 1.48
Pdzph1Q8BGR1 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Gm22240-201ENSMUST00000175225 82 ntBASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pdzph1Q8BGR1 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Mir6236-201ENSMUST00000184437 123 ntBASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pdzph1Q8BGR1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms