Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.29■■□□□ 1
Trim6Q8BGE7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim6Q8BGE7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
Trim6Q8BGE7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trim6Q8BGE7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim6Q8BGE7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim6Q8BGE7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim6Q8BGE7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Trim6Q8BGE7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Trim6Q8BGE7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.27■■□□□ 1
Trim6Q8BGE7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim6Q8BGE7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.27■■□□□ 1
Trim6Q8BGE7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim6Q8BGE7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Trim6Q8BGE7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim6Q8BGE7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trim6Q8BGE7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim6Q8BGE7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trim6Q8BGE7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim6Q8BGE7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim6Q8BGE7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim6Q8BGE7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim6Q8BGE7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trim6Q8BGE7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim6Q8BGE7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim6Q8BGE7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
Trim6Q8BGE7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.2■□□□□ 0.98
Trim6Q8BGE7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim6Q8BGE7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms