Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17■□□□□ 0.31
Upk3bQ80YF6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17■□□□□ 0.31
Upk3bQ80YF6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Upk3bQ80YF6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17■□□□□ 0.31
Upk3bQ80YF6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Upk3bQ80YF6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Upk3bQ80YF6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Upk3bQ80YF6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Upk3bQ80YF6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Upk3bQ80YF6 Golph3-202ENSMUST00000226517 2359 ntBASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.96■□□□□ 0.31
Upk3bQ80YF6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Upk3bQ80YF6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Upk3bQ80YF6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Upk3bQ80YF6 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Mir6538-201ENSMUST00000183713 110 ntBASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Upk3bQ80YF6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.93■□□□□ 0.3
Upk3bQ80YF6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Upk3bQ80YF6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms