Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc116Q80X53 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc116Q80X53 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc116Q80X53 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc116Q80X53 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc116Q80X53 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ccdc116Q80X53 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Golph3-202ENSMUST00000226517 2359 ntBASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.72■□□□□ 0.75
Ccdc116Q80X53 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ccdc116Q80X53 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ccdc116Q80X53 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Gm9959-201ENSMUST00000068277 390 ntBASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Ccdc116Q80X53 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc116Q80X53 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Gm7417-201ENSMUST00000192950 473 ntBASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Gm9870-201ENSMUST00000063874 645 ntBASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Ccdc116Q80X53 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Ccdc116Q80X53 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms