Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Trim62Q80V85 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim62Q80V85 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim62Q80V85 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim62Q80V85 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim62Q80V85 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim62Q80V85 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim62Q80V85 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim62Q80V85 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim62Q80V85 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.87■□□□□ 0.93
Trim62Q80V85 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.86■□□□□ 0.93
Trim62Q80V85 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim62Q80V85 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim62Q80V85 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim62Q80V85 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim62Q80V85 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trim62Q80V85 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim62Q80V85 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim62Q80V85 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim62Q80V85 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Trim62Q80V85 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Trim62Q80V85 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim62Q80V85 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim62Q80V85 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim62Q80V85 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.83■□□□□ 0.93
Trim62Q80V85 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim62Q80V85 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim62Q80V85 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim62Q80V85 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim62Q80V85 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim62Q80V85 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim62Q80V85 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim62Q80V85 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Trim62Q80V85 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.82■□□□□ 0.92
Trim62Q80V85 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim62Q80V85 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.82■□□□□ 0.92
Trim62Q80V85 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim62Q80V85 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.81■□□□□ 0.92
Trim62Q80V85 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim62Q80V85 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim62Q80V85 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trim62Q80V85 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim62Q80V85 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim62Q80V85 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim62Q80V85 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim62Q80V85 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim62Q80V85 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim62Q80V85 Gm43137-201ENSMUST00000198052 594 ntBASIC20.8■□□□□ 0.92
Trim62Q80V85 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim62Q80V85 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim62Q80V85 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim62Q80V85 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim62Q80V85 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim62Q80V85 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim62Q80V85 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim62Q80V85 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim62Q80V85 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim62Q80V85 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim62Q80V85 Gm27454-201ENSMUST00000185090 204 ntBASIC20.78■□□□□ 0.92
Trim62Q80V85 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim62Q80V85 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Trim62Q80V85 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim62Q80V85 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim62Q80V85 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trim62Q80V85 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim62Q80V85 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms