Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Chd4Q6PDQ2 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Chd4Q6PDQ2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Gm42569-201ENSMUST00000200539 472 ntBASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Chd4Q6PDQ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Gm14281-201ENSMUST00000121700 1294 ntBASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Chd4Q6PDQ2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Chd4Q6PDQ2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Chd4Q6PDQ2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC26.75■■□□□ 1.87
Chd4Q6PDQ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Chd4Q6PDQ2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chd4Q6PDQ2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC26.73■■□□□ 1.87
Chd4Q6PDQ2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Chd4Q6PDQ2 Gm27801-201ENSMUST00000184174 223 ntBASIC26.73■■□□□ 1.87
Chd4Q6PDQ2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Chd4Q6PDQ2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.72■■□□□ 1.87
Chd4Q6PDQ2 Mir6236-201ENSMUST00000184437 123 ntBASIC26.72■■□□□ 1.87
Chd4Q6PDQ2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 AV356131-201ENSMUST00000206201 750 ntBASIC26.71■■□□□ 1.87
Chd4Q6PDQ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Chd4Q6PDQ2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
Chd4Q6PDQ2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Chd4Q6PDQ2 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC26.7■■□□□ 1.86
Chd4Q6PDQ2 Gm32051-202ENSMUST00000197905 2385 ntBASIC26.7■■□□□ 1.86
Chd4Q6PDQ2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.69■■□□□ 1.86
Chd4Q6PDQ2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Chd4Q6PDQ2 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Chd4Q6PDQ2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC26.66■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms