Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpsf6Q6NVF9 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Etf1-202ENSMUST00000180351 108 ntBASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpsf6Q6NVF9 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cpsf6Q6NVF9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cpsf6Q6NVF9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf6Q6NVF9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf6Q6NVF9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf6Q6NVF9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cpsf6Q6NVF9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.44■□□□□ 0.7
Cpsf6Q6NVF9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cpsf6Q6NVF9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Gm9959-201ENSMUST00000068277 390 ntBASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cpsf6Q6NVF9 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cpsf6Q6NVF9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cpsf6Q6NVF9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cpsf6Q6NVF9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cpsf6Q6NVF9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms