Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Krt42Q6IFX2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Krt42Q6IFX2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Krt42Q6IFX2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Krt42Q6IFX2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Krt42Q6IFX2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Krt42Q6IFX2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Krt42Q6IFX2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Gm11687-201ENSMUST00000118911 886 ntBASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt42Q6IFX2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt42Q6IFX2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Krt42Q6IFX2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt42Q6IFX2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt42Q6IFX2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt42Q6IFX2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt42Q6IFX2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt42Q6IFX2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms