Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Notch3Q61982 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.31■□□□□ 0.04
Notch3Q61982 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Notch3Q61982 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.31■□□□□ 0.04
Notch3Q61982 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Notch3Q61982 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Notch3Q61982 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.3■□□□□ 0.04
Notch3Q61982 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.3■□□□□ 0.04
Notch3Q61982 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Notch3Q61982 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.3■□□□□ 0.04
Notch3Q61982 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Notch3Q61982 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Notch3Q61982 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Notch3Q61982 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Notch3Q61982 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.29■□□□□ 0.04
Notch3Q61982 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Notch3Q61982 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.29■□□□□ 0.04
Notch3Q61982 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Notch3Q61982 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Notch3Q61982 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Notch3Q61982 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Notch3Q61982 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Notch3Q61982 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Notch3Q61982 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Notch3Q61982 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Notch3Q61982 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Notch3Q61982 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Notch3Q61982 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Notch3Q61982 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Notch3Q61982 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Notch3Q61982 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Notch3Q61982 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.27■□□□□ 0.04
Notch3Q61982 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.27■□□□□ 0.04
Notch3Q61982 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Notch3Q61982 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Notch3Q61982 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Notch3Q61982 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Notch3Q61982 Spcs1-204ENSMUST00000226782 949 ntBASIC15.27■□□□□ 0.03
Notch3Q61982 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Notch3Q61982 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.26■□□□□ 0.03
Notch3Q61982 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC15.26■□□□□ 0.03
Notch3Q61982 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.26■□□□□ 0.03
Notch3Q61982 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Notch3Q61982 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Notch3Q61982 Gm42642-201ENSMUST00000200683 355 ntBASIC15.26■□□□□ 0.03
Notch3Q61982 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Notch3Q61982 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Notch3Q61982 Gm26833-201ENSMUST00000180899 440 ntBASIC15.25■□□□□ 0.03
Notch3Q61982 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.25■□□□□ 0.03
Notch3Q61982 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.25■□□□□ 0.03
Notch3Q61982 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.25■□□□□ 0.03
Notch3Q61982 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Notch3Q61982 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC15.24■□□□□ 0.03
Notch3Q61982 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Notch3Q61982 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms