Protein–RNA interactions for Protein: Q61474

Msi1, RNA-binding protein Musashi homolog 1, mousemouse

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msi1Q61474 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Msi1Q61474 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Msi1Q61474 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.76■□□□□ 0.91
Msi1Q61474 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Msi1Q61474 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Msi1Q61474 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.76■□□□□ 0.91
Msi1Q61474 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Msi1Q61474 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Msi1Q61474 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Msi1Q61474 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Msi1Q61474 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Msi1Q61474 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msi1Q61474 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msi1Q61474 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msi1Q61474 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Msi1Q61474 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Msi1Q61474 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msi1Q61474 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msi1Q61474 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Msi1Q61474 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.73■□□□□ 0.91
Msi1Q61474 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Msi1Q61474 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Msi1Q61474 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Msi1Q61474 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
Msi1Q61474 Mir7075-201ENSMUST00000184187 82 ntBASIC20.72■□□□□ 0.91
Msi1Q61474 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
Msi1Q61474 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.72■□□□□ 0.91
Msi1Q61474 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Msi1Q61474 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Msi1Q61474 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Msi1Q61474 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Msi1Q61474 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Msi1Q61474 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Msi1Q61474 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Msi1Q61474 Gm12251-201ENSMUST00000117893 792 ntBASIC20.71■□□□□ 0.91
Msi1Q61474 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Msi1Q61474 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Msi1Q61474 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Msi1Q61474 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Msi1Q61474 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Msi1Q61474 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msi1Q61474 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.7■□□□□ 0.9
Msi1Q61474 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msi1Q61474 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Msi1Q61474 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Msi1Q61474 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Msi1Q61474 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Msi1Q61474 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.69■□□□□ 0.9
Msi1Q61474 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msi1Q61474 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Msi1Q61474 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msi1Q61474 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Msi1Q61474 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msi1Q61474 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Msi1Q61474 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Msi1Q61474 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.68■□□□□ 0.9
Msi1Q61474 Gm6139-201ENSMUST00000079261 882 ntBASIC20.68■□□□□ 0.9
Msi1Q61474 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Msi1Q61474 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Msi1Q61474 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Msi1Q61474 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Msi1Q61474 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.67■□□□□ 0.9
Msi1Q61474 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.67■□□□□ 0.9
Msi1Q61474 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Msi1Q61474 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msi1Q61474 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Msi1Q61474 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Msi1Q61474 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Msi1Q61474 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms