Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.03■□□□□ 0.8
Cacna1eQ61290 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1eQ61290 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1eQ61290 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cacna1eQ61290 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1eQ61290 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1eQ61290 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.02■□□□□ 0.8
Cacna1eQ61290 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1eQ61290 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cacna1eQ61290 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Cacna1eQ61290 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.01■□□□□ 0.79
Cacna1eQ61290 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cacna1eQ61290 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.01■□□□□ 0.79
Cacna1eQ61290 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20■□□□□ 0.79
Cacna1eQ61290 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cacna1eQ61290 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cacna1eQ61290 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.99■□□□□ 0.79
Cacna1eQ61290 Gm27011-201ENSMUST00000182352 972 ntBASIC19.99■□□□□ 0.79
Cacna1eQ61290 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1eQ61290 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Cacna1eQ61290 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cacna1eQ61290 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cacna1eQ61290 Gm27801-201ENSMUST00000184174 223 ntBASIC19.97■□□□□ 0.79
Cacna1eQ61290 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cacna1eQ61290 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cacna1eQ61290 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1eQ61290 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.95■□□□□ 0.78
Cacna1eQ61290 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1eQ61290 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1eQ61290 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.95■□□□□ 0.78
Cacna1eQ61290 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cacna1eQ61290 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.94■□□□□ 0.78
Cacna1eQ61290 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cacna1eQ61290 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.93■□□□□ 0.78
Cacna1eQ61290 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cacna1eQ61290 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Cacna1eQ61290 Gm12933-201ENSMUST00000120203 872 ntBASIC19.92■□□□□ 0.78
Cacna1eQ61290 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cacna1eQ61290 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cacna1eQ61290 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms