Protein–RNA interactions for Protein: Q61056

Trpc1, Short transient receptor potential channel 1, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpc1Q61056 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trpc1Q61056 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.51■□□□□ 0.71
Trpc1Q61056 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.51■□□□□ 0.71
Trpc1Q61056 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.51■□□□□ 0.71
Trpc1Q61056 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trpc1Q61056 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.5■□□□□ 0.71
Trpc1Q61056 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpc1Q61056 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpc1Q61056 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpc1Q61056 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trpc1Q61056 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trpc1Q61056 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpc1Q61056 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trpc1Q61056 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Trpc1Q61056 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.49■□□□□ 0.71
Trpc1Q61056 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trpc1Q61056 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trpc1Q61056 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trpc1Q61056 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
Trpc1Q61056 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trpc1Q61056 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.47■□□□□ 0.71
Trpc1Q61056 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Trpc1Q61056 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trpc1Q61056 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trpc1Q61056 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.47■□□□□ 0.71
Trpc1Q61056 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.47■□□□□ 0.71
Trpc1Q61056 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trpc1Q61056 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trpc1Q61056 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trpc1Q61056 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trpc1Q61056 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trpc1Q61056 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.45■□□□□ 0.7
Trpc1Q61056 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trpc1Q61056 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trpc1Q61056 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpc1Q61056 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpc1Q61056 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.44■□□□□ 0.7
Trpc1Q61056 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trpc1Q61056 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpc1Q61056 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trpc1Q61056 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trpc1Q61056 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.43■□□□□ 0.7
Trpc1Q61056 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.43■□□□□ 0.7
Trpc1Q61056 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.43■□□□□ 0.7
Trpc1Q61056 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Trpc1Q61056 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.43■□□□□ 0.7
Trpc1Q61056 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Trpc1Q61056 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trpc1Q61056 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trpc1Q61056 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms