Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 AC116713.1-201ENSMUST00000215074 430 ntBASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav7d-4Q5R1H9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Gm9939-201ENSMUST00000067161 1154 ntBASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.32■□□□□ 0.04
Trav7d-4Q5R1H9 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.31■□□□□ 0.04
Trav7d-4Q5R1H9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav7d-4Q5R1H9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Golph3-205ENSMUST00000228671 2842 ntBASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav7d-4Q5R1H9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav7d-4Q5R1H9 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav7d-4Q5R1H9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.27■□□□□ 0.03
Trav7d-4Q5R1H9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav7d-4Q5R1H9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms