Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.3■□□□□ 0.84
Usp30Q3UN04 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.29■□□□□ 0.84
Usp30Q3UN04 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp30Q3UN04 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.28■□□□□ 0.84
Usp30Q3UN04 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Mir6236-201ENSMUST00000184437 123 ntBASIC20.28■□□□□ 0.84
Usp30Q3UN04 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Usp30Q3UN04 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Usp30Q3UN04 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.27■□□□□ 0.84
Usp30Q3UN04 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp30Q3UN04 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Gm10493-201ENSMUST00000097270 612 ntBASIC20.27■□□□□ 0.84
Usp30Q3UN04 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Usp30Q3UN04 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Gm40848-201ENSMUST00000221998 324 ntBASIC20.26■□□□□ 0.83
Usp30Q3UN04 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Usp30Q3UN04 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Usp30Q3UN04 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Usp30Q3UN04 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.23■□□□□ 0.83
Usp30Q3UN04 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.23■□□□□ 0.83
Usp30Q3UN04 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Usp30Q3UN04 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.22■□□□□ 0.83
Usp30Q3UN04 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Usp30Q3UN04 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Usp30Q3UN04 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Usp30Q3UN04 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp30Q3UN04 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Usp30Q3UN04 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Usp30Q3UN04 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Usp30Q3UN04 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms