Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cul4aQ3TCH7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.21■□□□□ 0.99
Cul4aQ3TCH7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cul4aQ3TCH7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Cul4aQ3TCH7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Gm7143-201ENSMUST00000222811 859 ntBASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cul4aQ3TCH7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cul4aQ3TCH7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.19■□□□□ 0.98
Cul4aQ3TCH7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.19■□□□□ 0.98
Cul4aQ3TCH7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cul4aQ3TCH7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cul4aQ3TCH7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cul4aQ3TCH7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cul4aQ3TCH7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Cul4aQ3TCH7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cul4aQ3TCH7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Cul4aQ3TCH7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Iqck-206ENSMUST00000208658 2891 ntBASIC21.15■□□□□ 0.98
Cul4aQ3TCH7 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cul4aQ3TCH7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cul4aQ3TCH7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cul4aQ3TCH7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cul4aQ3TCH7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cul4aQ3TCH7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.1■□□□□ 0.97
Cul4aQ3TCH7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Gm40881-201ENSMUST00000223397 166 ntBASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cul4aQ3TCH7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.08■□□□□ 0.97
Cul4aQ3TCH7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms