Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Q3KNL4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Q3KNL4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Q3KNL4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.72■□□□□ 0.75
Q3KNL4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.72■□□□□ 0.75
Q3KNL4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Q3KNL4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.71■□□□□ 0.75
Q3KNL4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.71■□□□□ 0.75
Q3KNL4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Q3KNL4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Q3KNL4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.7■□□□□ 0.74
Q3KNL4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3KNL4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Q3KNL4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Q3KNL4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.69■□□□□ 0.74
Q3KNL4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.69■□□□□ 0.74
Q3KNL4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Q3KNL4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.69■□□□□ 0.74
Q3KNL4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Q3KNL4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.68■□□□□ 0.74
Q3KNL4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.68■□□□□ 0.74
Q3KNL4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Q3KNL4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.68■□□□□ 0.74
Q3KNL4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.67■□□□□ 0.74
Q3KNL4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Q3KNL4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Q3KNL4 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Q3KNL4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Q3KNL4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Q3KNL4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Q3KNL4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Q3KNL4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Q3KNL4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Q3KNL4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q3KNL4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q3KNL4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Q3KNL4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.64■□□□□ 0.74
Q3KNL4 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.64■□□□□ 0.73
Q3KNL4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Q3KNL4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.64■□□□□ 0.73
Q3KNL4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.64■□□□□ 0.73
Q3KNL4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q3KNL4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Q3KNL4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms