Protein–RNA interactions for Protein: P97433

Arhgef28, Rho guanine nucleotide exchange factor 28, mousemouse

Predictions only

Length 1,693 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef28P97433 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef28P97433 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Arhgef28P97433 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC28.17■■■□□ 2.1
Arhgef28P97433 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Arhgef28P97433 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef28P97433 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Arhgef28P97433 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef28P97433 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Arhgef28P97433 Gm13234-201ENSMUST00000120010 747 ntBASIC28.16■■■□□ 2.1
Arhgef28P97433 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef28P97433 Gm37415-201ENSMUST00000192265 2054 ntBASIC28.15■■■□□ 2.1
Arhgef28P97433 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef28P97433 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Arhgef28P97433 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Arhgef28P97433 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Arhgef28P97433 Ap3s1-204ENSMUST00000225520 957 ntBASIC28.14■■■□□ 2.1
Arhgef28P97433 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Arhgef28P97433 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Arhgef28P97433 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Arhgef28P97433 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Arhgef28P97433 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Arhgef28P97433 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Gm27801-201ENSMUST00000184174 223 ntBASIC28.13■■■□□ 2.09
Arhgef28P97433 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
Arhgef28P97433 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC28.13■■■□□ 2.09
Arhgef28P97433 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Arhgef28P97433 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef28P97433 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Arhgef28P97433 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef28P97433 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Arhgef28P97433 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef28P97433 Reep4-203ENSMUST00000226563 1444 ntBASIC28.11■■■□□ 2.09
Arhgef28P97433 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef28P97433 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.11■■■□□ 2.09
Arhgef28P97433 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC28.11■■■□□ 2.09
Arhgef28P97433 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef28P97433 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Arhgef28P97433 Gm9988-201ENSMUST00000069786 435 ntBASIC28.1■■■□□ 2.09
Arhgef28P97433 Gm10602-201ENSMUST00000098239 609 ntBASIC28.1■■■□□ 2.09
Arhgef28P97433 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Arhgef28P97433 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef28P97433 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef28P97433 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef28P97433 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef28P97433 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC28.1■■■□□ 2.09
Arhgef28P97433 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Arhgef28P97433 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Arhgef28P97433 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
Arhgef28P97433 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Arhgef28P97433 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Arhgef28P97433 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef28P97433 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC28.08■■■□□ 2.09
Arhgef28P97433 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef28P97433 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC28.08■■■□□ 2.09
Arhgef28P97433 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC28.08■■■□□ 2.09
Arhgef28P97433 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
Arhgef28P97433 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Arhgef28P97433 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef28P97433 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC28.07■■■□□ 2.08
Arhgef28P97433 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef28P97433 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Arhgef28P97433 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Arhgef28P97433 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef28P97433 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC28.05■■■□□ 2.08
Arhgef28P97433 Mir6236-201ENSMUST00000184437 123 ntBASIC28.05■■■□□ 2.08
Arhgef28P97433 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef28P97433 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC28.05■■■□□ 2.08
Arhgef28P97433 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
Arhgef28P97433 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Arhgef28P97433 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef28P97433 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef28P97433 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef28P97433 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Arhgef28P97433 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef28P97433 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Arhgef28P97433 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Arhgef28P97433 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
Arhgef28P97433 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC28.03■■■□□ 2.08
Arhgef28P97433 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC28.03■■■□□ 2.08
Arhgef28P97433 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC28.03■■■□□ 2.08
Arhgef28P97433 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Gm44949-201ENSMUST00000206423 1450 ntBASIC28.02■■■□□ 2.08
Arhgef28P97433 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Arhgef28P97433 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC28.01■■■□□ 2.07
Arhgef28P97433 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC28.01■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms