Protein–RNA interactions for Protein: P61358

Rpl27, 60S ribosomal protein L27, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl27P61358 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Rpl27P61358 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Rpl27P61358 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.98■□□□□ 0.47
Rpl27P61358 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rpl27P61358 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Rpl27P61358 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rpl27P61358 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpl27P61358 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpl27P61358 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.96■□□□□ 0.47
Rpl27P61358 Etf1-202ENSMUST00000180351 108 ntBASIC17.96■□□□□ 0.47
Rpl27P61358 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rpl27P61358 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.96■□□□□ 0.47
Rpl27P61358 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Rpl27P61358 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rpl27P61358 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.95■□□□□ 0.46
Rpl27P61358 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rpl27P61358 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.95■□□□□ 0.46
Rpl27P61358 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rpl27P61358 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rpl27P61358 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpl27P61358 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Gm9870-201ENSMUST00000063874 645 ntBASIC17.94■□□□□ 0.46
Rpl27P61358 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rpl27P61358 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rpl27P61358 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpl27P61358 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rpl27P61358 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpl27P61358 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.93■□□□□ 0.46
Rpl27P61358 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpl27P61358 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpl27P61358 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rpl27P61358 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpl27P61358 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpl27P61358 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpl27P61358 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpl27P61358 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rpl27P61358 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpl27P61358 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpl27P61358 Gm9959-201ENSMUST00000068277 390 ntBASIC17.91■□□□□ 0.46
Rpl27P61358 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
Rpl27P61358 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.91■□□□□ 0.46
Rpl27P61358 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.91■□□□□ 0.46
Rpl27P61358 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.9■□□□□ 0.46
Rpl27P61358 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpl27P61358 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rpl27P61358 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.89■□□□□ 0.45
Rpl27P61358 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17.89■□□□□ 0.45
Rpl27P61358 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.89■□□□□ 0.45
Rpl27P61358 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Notumos-201ENSMUST00000151998 2659 ntBASIC17.89■□□□□ 0.45
Rpl27P61358 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpl27P61358 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms