Protein–RNA interactions for Protein: P60229

Eif3e, Eukaryotic translation initiation factor 3 subunit E, mousemouse

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eif3eP60229 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Eif3eP60229 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Eif3eP60229 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Eif3eP60229 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Eif3eP60229 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.76■□□□□ 0.91
Eif3eP60229 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Eif3eP60229 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Eif3eP60229 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.75■□□□□ 0.91
Eif3eP60229 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.75■□□□□ 0.91
Eif3eP60229 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.75■□□□□ 0.91
Eif3eP60229 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Eif3eP60229 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Eif3eP60229 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Eif3eP60229 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Eif3eP60229 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Eif3eP60229 Gm5812-201ENSMUST00000061073 957 ntBASIC20.74■□□□□ 0.91
Eif3eP60229 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Eif3eP60229 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.73■□□□□ 0.91
Eif3eP60229 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Eif3eP60229 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Eif3eP60229 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Eif3eP60229 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Eif3eP60229 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Eif3eP60229 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Eif3eP60229 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Eif3eP60229 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Eif3eP60229 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.72■□□□□ 0.91
Eif3eP60229 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.71■□□□□ 0.91
Eif3eP60229 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Eif3eP60229 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Eif3eP60229 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Eif3eP60229 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Eif3eP60229 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Eif3eP60229 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Eif3eP60229 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.69■□□□□ 0.9
Eif3eP60229 Gm15546-201ENSMUST00000122095 826 ntBASIC20.69■□□□□ 0.9
Eif3eP60229 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Eif3eP60229 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Eif3eP60229 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Eif3eP60229 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Eif3eP60229 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.67■□□□□ 0.9
Eif3eP60229 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.67■□□□□ 0.9
Eif3eP60229 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Eif3eP60229 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.67■□□□□ 0.9
Eif3eP60229 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Eif3eP60229 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Eif3eP60229 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Eif3eP60229 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
Eif3eP60229 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Eif3eP60229 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms