Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.35■□□□□ 0.69
Cdkn2bP55271 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Gm13238-201ENSMUST00000117655 780 ntBASIC19.34■□□□□ 0.69
Cdkn2bP55271 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cdkn2bP55271 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkn2bP55271 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cdkn2bP55271 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.33■□□□□ 0.69
Cdkn2bP55271 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdkn2bP55271 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.33■□□□□ 0.68
Cdkn2bP55271 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cdkn2bP55271 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkn2bP55271 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkn2bP55271 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.32■□□□□ 0.68
Cdkn2bP55271 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.32■□□□□ 0.68
Cdkn2bP55271 Gm10399-202ENSMUST00000202768 748 ntBASIC19.32■□□□□ 0.68
Cdkn2bP55271 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkn2bP55271 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.31■□□□□ 0.68
Cdkn2bP55271 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Gm43566-201ENSMUST00000196851 808 ntBASIC19.31■□□□□ 0.68
Cdkn2bP55271 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.31■□□□□ 0.68
Cdkn2bP55271 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdkn2bP55271 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkn2bP55271 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkn2bP55271 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkn2bP55271 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cdkn2bP55271 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdkn2bP55271 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Cdkn2bP55271 Cap2-205ENSMUST00000225824 1634 ntBASIC19.25■□□□□ 0.67
Cdkn2bP55271 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Cdkn2bP55271 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms