Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.14■□□□□ 0.33
Hmga2P52927 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hmga2P52927 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Hmga2P52927 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
Hmga2P52927 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hmga2P52927 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Hmga2P52927 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.12■□□□□ 0.33
Hmga2P52927 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hmga2P52927 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Hmga2P52927 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmga2P52927 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmga2P52927 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Hmga2P52927 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.11■□□□□ 0.33
Hmga2P52927 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.11■□□□□ 0.33
Hmga2P52927 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.11■□□□□ 0.33
Hmga2P52927 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hmga2P52927 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
Hmga2P52927 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hmga2P52927 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hmga2P52927 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Hmga2P52927 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Hmga2P52927 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hmga2P52927 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Hmga2P52927 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.09■□□□□ 0.33
Hmga2P52927 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Hmga2P52927 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hmga2P52927 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hmga2P52927 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hmga2P52927 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmga2P52927 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hmga2P52927 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
Hmga2P52927 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.08■□□□□ 0.32
Hmga2P52927 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Hmga2P52927 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Hmga2P52927 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hmga2P52927 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Hmga2P52927 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.07■□□□□ 0.32
Hmga2P52927 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hmga2P52927 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga2P52927 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga2P52927 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.06■□□□□ 0.32
Hmga2P52927 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hmga2P52927 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms