Protein–RNA interactions for Protein: P50516

Atp6v1a, V-type proton ATPase catalytic subunit A, mousemouse

Known RBP Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1aP50516 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1aP50516 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Atp6v1aP50516 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Atp6v1aP50516 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Atp6v1aP50516 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC24.32■■□□□ 1.48
Atp6v1aP50516 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Atp6v1aP50516 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
Atp6v1aP50516 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Gm9988-201ENSMUST00000069786 435 ntBASIC24.3■■□□□ 1.48
Atp6v1aP50516 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1aP50516 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Atp6v1aP50516 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atp6v1aP50516 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Atp6v1aP50516 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.29■■□□□ 1.48
Atp6v1aP50516 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Atp6v1aP50516 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Atp6v1aP50516 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Gm10602-201ENSMUST00000098239 609 ntBASIC24.27■■□□□ 1.48
Atp6v1aP50516 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Atp6v1aP50516 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Atp6v1aP50516 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC24.26■■□□□ 1.47
Atp6v1aP50516 AC137127.1-201ENSMUST00000213466 1078 ntBASIC24.26■■□□□ 1.47
Atp6v1aP50516 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Atp6v1aP50516 Gm43403-201ENSMUST00000198011 1786 ntBASIC24.26■■□□□ 1.47
Atp6v1aP50516 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atp6v1aP50516 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atp6v1aP50516 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Atp6v1aP50516 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC24.24■■□□□ 1.47
Atp6v1aP50516 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Atp6v1aP50516 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Atp6v1aP50516 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.22■■□□□ 1.47
Atp6v1aP50516 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Atp6v1aP50516 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Atp6v1aP50516 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Atp6v1aP50516 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Atp6v1aP50516 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atp6v1aP50516 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Atp6v1aP50516 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Atp6v1aP50516 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC24.2■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms