Protein–RNA interactions for Protein: P47955

Rplp1, 60S acidic ribosomal protein P1, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rplp1P47955 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rplp1P47955 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rplp1P47955 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.42■□□□□ 0.22
Rplp1P47955 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rplp1P47955 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rplp1P47955 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rplp1P47955 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
Rplp1P47955 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Rplp1P47955 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.41■□□□□ 0.22
Rplp1P47955 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rplp1P47955 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rplp1P47955 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Rplp1P47955 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Rplp1P47955 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Rplp1P47955 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rplp1P47955 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.39■□□□□ 0.21
Rplp1P47955 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.39■□□□□ 0.21
Rplp1P47955 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC16.39■□□□□ 0.21
Rplp1P47955 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.39■□□□□ 0.21
Rplp1P47955 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rplp1P47955 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Rplp1P47955 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rplp1P47955 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.38■□□□□ 0.21
Rplp1P47955 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.38■□□□□ 0.21
Rplp1P47955 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Rplp1P47955 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rplp1P47955 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rplp1P47955 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.37■□□□□ 0.21
Rplp1P47955 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rplp1P47955 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Rplp1P47955 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Rplp1P47955 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rplp1P47955 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rplp1P47955 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rplp1P47955 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.36■□□□□ 0.21
Rplp1P47955 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
Rplp1P47955 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rplp1P47955 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.35■□□□□ 0.21
Rplp1P47955 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Gm9847-201ENSMUST00000052528 599 ntBASIC16.35■□□□□ 0.21
Rplp1P47955 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.35■□□□□ 0.21
Rplp1P47955 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rplp1P47955 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rplp1P47955 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rplp1P47955 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms