Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Vps4bP46467 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps4bP46467 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vps4bP46467 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.37■□□□□ 0.85
Vps4bP46467 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vps4bP46467 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Vps4bP46467 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.37■□□□□ 0.85
Vps4bP46467 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vps4bP46467 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Vps4bP46467 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Gm45102-201ENSMUST00000207427 857 ntBASIC20.36■□□□□ 0.85
Vps4bP46467 Gm7143-201ENSMUST00000222811 859 ntBASIC20.36■□□□□ 0.85
Vps4bP46467 Gm40881-201ENSMUST00000223397 166 ntBASIC20.36■□□□□ 0.85
Vps4bP46467 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vps4bP46467 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps4bP46467 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.35■□□□□ 0.85
Vps4bP46467 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps4bP46467 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps4bP46467 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps4bP46467 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps4bP46467 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps4bP46467 Gm14117-201ENSMUST00000122417 843 ntBASIC20.34■□□□□ 0.85
Vps4bP46467 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vps4bP46467 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps4bP46467 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Vps4bP46467 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vps4bP46467 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps4bP46467 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps4bP46467 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps4bP46467 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps4bP46467 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.33■□□□□ 0.85
Vps4bP46467 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Vps4bP46467 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.33■□□□□ 0.85
Vps4bP46467 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.33■□□□□ 0.85
Vps4bP46467 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps4bP46467 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps4bP46467 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps4bP46467 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps4bP46467 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps4bP46467 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vps4bP46467 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps4bP46467 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.32■□□□□ 0.84
Vps4bP46467 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps4bP46467 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps4bP46467 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps4bP46467 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.31■□□□□ 0.84
Vps4bP46467 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps4bP46467 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vps4bP46467 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps4bP46467 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.3■□□□□ 0.84
Vps4bP46467 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Vps4bP46467 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps4bP46467 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps4bP46467 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps4bP46467 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps4bP46467 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Vps4bP46467 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps4bP46467 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.28■□□□□ 0.84
Vps4bP46467 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.28■□□□□ 0.84
Vps4bP46467 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Vps4bP46467 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps4bP46467 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Vps4bP46467 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vps4bP46467 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps4bP46467 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vps4bP46467 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vps4bP46467 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps4bP46467 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms