Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca1P41233 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Abca1P41233 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Abca1P41233 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Abca1P41233 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Abca1P41233 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca1P41233 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abca1P41233 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Abca1P41233 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.61■□□□□ 0.25
Abca1P41233 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Gm10033-202ENSMUST00000211874 928 ntBASIC16.61■□□□□ 0.25
Abca1P41233 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Abca1P41233 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Abca1P41233 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Abca1P41233 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.61■□□□□ 0.25
Abca1P41233 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abca1P41233 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Abca1P41233 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.6■□□□□ 0.25
Abca1P41233 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Abca1P41233 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.6■□□□□ 0.25
Abca1P41233 Gm40848-201ENSMUST00000221998 324 ntBASIC16.6■□□□□ 0.25
Abca1P41233 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abca1P41233 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abca1P41233 Gm43530-201ENSMUST00000195920 274 ntBASIC16.59■□□□□ 0.25
Abca1P41233 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abca1P41233 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.58■□□□□ 0.25
Abca1P41233 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Abca1P41233 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca1P41233 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca1P41233 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca1P41233 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca1P41233 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Abca1P41233 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Abca1P41233 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.57■□□□□ 0.24
Abca1P41233 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Abca1P41233 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Abca1P41233 Smad6-203ENSMUST00000179458 273 ntBASIC16.57■□□□□ 0.24
Abca1P41233 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca1P41233 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca1P41233 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.56■□□□□ 0.24
Abca1P41233 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.56■□□□□ 0.24
Abca1P41233 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC16.56■□□□□ 0.24
Abca1P41233 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Abca1P41233 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Abca1P41233 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Abca1P41233 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.56■□□□□ 0.24
Abca1P41233 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Abca1P41233 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.56■□□□□ 0.24
Abca1P41233 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca1P41233 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Abca1P41233 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.56■□□□□ 0.24
Abca1P41233 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Abca1P41233 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.55■□□□□ 0.24
Abca1P41233 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Abca1P41233 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Abca1P41233 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Abca1P41233 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Abca1P41233 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Abca1P41233 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms