Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Sox5P35710 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Sox5P35710 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Sox5P35710 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox5P35710 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sox5P35710 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox5P35710 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.04■■□□□ 1.12
Sox5P35710 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Sox5P35710 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Sox5P35710 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox5P35710 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox5P35710 Gm43566-201ENSMUST00000196851 808 ntBASIC22.03■■□□□ 1.12
Sox5P35710 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox5P35710 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Sox5P35710 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.03■■□□□ 1.12
Sox5P35710 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Sox5P35710 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Sox5P35710 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Sox5P35710 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Sox5P35710 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Sox5P35710 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sox5P35710 Gm10399-202ENSMUST00000202768 748 ntBASIC22.01■■□□□ 1.11
Sox5P35710 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Sox5P35710 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Sox5P35710 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox5P35710 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox5P35710 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox5P35710 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Sox5P35710 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sox5P35710 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22■■□□□ 1.11
Sox5P35710 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.99■■□□□ 1.11
Sox5P35710 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Sox5P35710 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Sox5P35710 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
Sox5P35710 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.98■■□□□ 1.11
Sox5P35710 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.98■■□□□ 1.11
Sox5P35710 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.98■■□□□ 1.11
Sox5P35710 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Sox5P35710 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.97■■□□□ 1.11
Sox5P35710 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.97■■□□□ 1.11
Sox5P35710 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.97■■□□□ 1.11
Sox5P35710 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Sox5P35710 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.96■■□□□ 1.11
Sox5P35710 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox5P35710 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Sox5P35710 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
Sox5P35710 Gm5921-201ENSMUST00000075898 882 ntBASIC21.96■■□□□ 1.11
Sox5P35710 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox5P35710 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Sox5P35710 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.96■■□□□ 1.11
Sox5P35710 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Sox5P35710 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Sox5P35710 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox5P35710 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.95■■□□□ 1.1
Sox5P35710 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Sox5P35710 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox5P35710 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox5P35710 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Sox5P35710 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Sox5P35710 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox5P35710 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox5P35710 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Sox5P35710 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
Sox5P35710 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox5P35710 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
Sox5P35710 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Sox5P35710 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.93■■□□□ 1.1
Sox5P35710 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Sox5P35710 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Sox5P35710 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.92■■□□□ 1.1
Sox5P35710 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms