Protein–RNA interactions for Protein: P35276

Rab3d, Ras-related protein Rab-3D, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3dP35276 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Gm11687-201ENSMUST00000118911 886 ntBASIC16.79■□□□□ 0.28
Rab3dP35276 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.79■□□□□ 0.28
Rab3dP35276 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rab3dP35276 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rab3dP35276 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC16.78■□□□□ 0.28
Rab3dP35276 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rab3dP35276 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.78■□□□□ 0.28
Rab3dP35276 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab3dP35276 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.78■□□□□ 0.28
Rab3dP35276 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rab3dP35276 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rab3dP35276 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab3dP35276 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab3dP35276 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rab3dP35276 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.76■□□□□ 0.27
Rab3dP35276 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab3dP35276 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.75■□□□□ 0.27
Rab3dP35276 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rab3dP35276 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.75■□□□□ 0.27
Rab3dP35276 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab3dP35276 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.74■□□□□ 0.27
Rab3dP35276 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab3dP35276 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab3dP35276 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab3dP35276 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab3dP35276 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab3dP35276 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.74■□□□□ 0.27
Rab3dP35276 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab3dP35276 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rab3dP35276 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab3dP35276 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Rab3dP35276 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.73■□□□□ 0.27
Rab3dP35276 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.73■□□□□ 0.27
Rab3dP35276 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rab3dP35276 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.73■□□□□ 0.27
Rab3dP35276 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab3dP35276 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rab3dP35276 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab3dP35276 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab3dP35276 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab3dP35276 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rab3dP35276 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.71■□□□□ 0.27
Rab3dP35276 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.71■□□□□ 0.27
Rab3dP35276 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rab3dP35276 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.71■□□□□ 0.27
Rab3dP35276 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Rab3dP35276 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rab3dP35276 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab3dP35276 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.7■□□□□ 0.26
Rab3dP35276 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.7■□□□□ 0.26
Rab3dP35276 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rab3dP35276 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Rab3dP35276 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms